STRINGSTRING
PSEBR_a66 PSEBR_a66 AEA69979.1 AEA69979.1 AEA71733.1 AEA71733.1 AEA69978.1 AEA69978.1 AEA71732.1 AEA71732.1 AEA66523.1 AEA66523.1 AEA69959.1 AEA69959.1 AEA69961.1 AEA69961.1 AEA66522.1 AEA66522.1 AEA69960.1 AEA69960.1 PSEBR_a65 PSEBR_a65
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEBR_a66Putative ABC transporter, periplasmic component. (306 aa)    
Predicted Functional Partners:
AEA69979.1
Putative Glycine betaine ABC transporter, ATP-binding component.
 
 0.938
AEA71733.1
Putative glycine betaine/L-proline ABC transporter, ATP-binding component.
 
 0.930
AEA69978.1
Putative Glycine betaine ABC transporter, permease component.
  
 0.905
AEA71732.1
Putative glycine betaine/L-proline ABC transporter, permease component.
  
 0.903
AEA66523.1
Putative ABC transporter, ATP-binding component.
 
 
 0.884
AEA69959.1
Glycine betaine ABC transporter, permease component.
  
 0.866
AEA69961.1
Glycine betaine ABC transporter, ATP-binding component.
 
 
 0.860
AEA66522.1
Putative ABC transporter, permease component.
  
 0.860
AEA69960.1
Glycine betaine ABC transporter, permease component.
  
 0.850
PSEBR_a65
Putative choline-sulfatase.
 
     0.784
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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