STRINGSTRING
PSEBR_a70 PSEBR_a70 AEA68671.1 AEA68671.1 AEA68674.1 AEA68674.1 hemF hemF AEA70306.1 AEA70306.1 aroE-2 aroE-2 AEA68672.1 AEA68672.1 AEA68732.1 AEA68732.1 AEA70313.1 AEA70313.1 AEA68731.1 AEA68731.1 AEA68106.1 AEA68106.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEBR_a70NADPH:quinone reductase. (325 aa)    
Predicted Functional Partners:
AEA68671.1
Putative peptide synthase.
  
 
 0.696
AEA68674.1
Putative peptide synthase.
 
  
 0.581
hemF
Coproporphyrinogen oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
       0.572
AEA70306.1
Pyoverdine synthetase.
 
  
 0.564
aroE-2
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
       0.560
AEA68672.1
Putative peptide synthase.
  
  
 0.549
AEA68732.1
Putative polyketide synthase.
  
 
 0.502
AEA70313.1
Putative non-ribosomal peptide synthetase.
 
  
 0.493
AEA68731.1
Putative polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.489
AEA68106.1
Putative oxidoreductase.
 
  
 0.433
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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