STRINGSTRING
PSEBR_a73 PSEBR_a73 AEA66569.1 AEA66569.1 AEA66567.1 AEA66567.1 AEA66566.1 AEA66566.1 AEA66565.1 AEA66565.1 AEA66568.1 AEA66568.1 AEA67289.1 AEA67289.1 AEA70444.1 AEA70444.1 AEA67478.1 AEA67478.1 AEA71268.1 AEA71268.1 AEA71264.1 AEA71264.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEBR_a73Conserved hypothetical protein. (341 aa)    
Predicted Functional Partners:
AEA66569.1
Type IV fimbriae biogenesis protein.
 
 
 
 0.952
AEA66567.1
Putative type IV fimbriae biogenesis protein.
 
 
   0.887
AEA66566.1
Putative type IV fimbriae biogenesis protein.
  
 
   0.886
AEA66565.1
Putative type IV fimbriae biogenesis protein.
  
 
   0.883
AEA66568.1
Putative type IV fimbriae biogenesis protein.
 
 
   0.881
AEA67289.1
Putative phage tail protein; putative baseplate J-like protein.
  
 
 0.816
AEA70444.1
Putative type IV secretion system protein, pilus assembly.
  
    0.781
AEA67478.1
Conserved hypothetical protein.
 
   0.747
AEA71268.1
Putative Tfp pilus assembly protein.
  
     0.745
AEA71264.1
Two-component system, sensor kinase.
  
     0.735
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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