Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA66563.1 | AEA66986.1 | PSEBR_a420 | PSEBR_a821 | Putative malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)). | Putative auxin efflux carrier (membrane transport protein). | 0.887 |
AEA66984.1 | AEA66985.1 | PSEBR_a819 | PSEBR_a820 | Putative sugar (glucarate) ABC transporter, permease component. | D-galactarate dehydratase. | 0.878 |
AEA66984.1 | AEA66986.1 | PSEBR_a819 | PSEBR_a821 | Putative sugar (glucarate) ABC transporter, permease component. | Putative auxin efflux carrier (membrane transport protein). | 0.446 |
AEA66985.1 | AEA66984.1 | PSEBR_a820 | PSEBR_a819 | D-galactarate dehydratase. | Putative sugar (glucarate) ABC transporter, permease component. | 0.878 |
AEA66985.1 | AEA66986.1 | PSEBR_a820 | PSEBR_a821 | D-galactarate dehydratase. | Putative auxin efflux carrier (membrane transport protein). | 0.468 |
AEA66986.1 | AEA66563.1 | PSEBR_a821 | PSEBR_a420 | Putative auxin efflux carrier (membrane transport protein). | Putative malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)). | 0.887 |
AEA66986.1 | AEA66984.1 | PSEBR_a821 | PSEBR_a819 | Putative auxin efflux carrier (membrane transport protein). | Putative sugar (glucarate) ABC transporter, permease component. | 0.446 |
AEA66986.1 | AEA66985.1 | PSEBR_a821 | PSEBR_a820 | Putative auxin efflux carrier (membrane transport protein). | D-galactarate dehydratase. | 0.468 |
AEA66986.1 | AEA69733.1 | PSEBR_a821 | PSEBR_a3410 | Putative auxin efflux carrier (membrane transport protein). | Putative transcriptional regulator. | 0.474 |
AEA69733.1 | AEA66986.1 | PSEBR_a3410 | PSEBR_a821 | Putative transcriptional regulator. | Putative auxin efflux carrier (membrane transport protein). | 0.474 |