Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA67032.1 | AEA69724.1 | PSEBR_a866 | PSEBR_a3401 | Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | 0.924 |
AEA67032.1 | AEA69828.1 | PSEBR_a866 | PSEBR_a3492 | Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Putative dehydrogenase. | 0.917 |
AEA67032.1 | AEA69919.1 | PSEBR_a866 | PSEBR_a3580 | Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Isocitrate lyase. | 0.907 |
AEA67032.1 | AEA70088.1 | PSEBR_a866 | PSEBR_a3736 | Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glycolate oxidase, subunit D. | 0.913 |
AEA67032.1 | AEA70089.1 | PSEBR_a866 | PSEBR_a3737 | Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glycolate oxidase, subunit E. | 0.923 |
AEA67032.1 | AEA70562.1 | PSEBR_a866 | PSEBR_a4158 | Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 2-hydroxy-3-oxopropionate reductase. | 0.908 |
AEA67032.1 | AEA70563.1 | PSEBR_a866 | PSEBR_a4159 | Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Putative hydroxypyruvate reductase. | 0.917 |
AEA67032.1 | AEA71097.1 | PSEBR_a866 | PSEBR_a4680 | Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Gluconate 2-dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.922 |
AEA67032.1 | glcB | PSEBR_a866 | PSEBR_a5188 | Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.914 |
AEA67032.1 | gph | PSEBR_a866 | PSEBR_a5122 | Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Putative phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.915 |
AEA69724.1 | AEA67032.1 | PSEBR_a3401 | PSEBR_a866 | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.924 |
AEA69724.1 | AEA69828.1 | PSEBR_a3401 | PSEBR_a3492 | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | Putative dehydrogenase. | 0.901 |
AEA69724.1 | AEA70562.1 | PSEBR_a3401 | PSEBR_a4158 | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | 2-hydroxy-3-oxopropionate reductase. | 0.922 |
AEA69724.1 | AEA70563.1 | PSEBR_a3401 | PSEBR_a4159 | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | Putative hydroxypyruvate reductase. | 0.903 |
AEA69724.1 | AEA71097.1 | PSEBR_a3401 | PSEBR_a4680 | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | Gluconate 2-dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.921 |
AEA69828.1 | AEA67032.1 | PSEBR_a3492 | PSEBR_a866 | Putative dehydrogenase. | Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.917 |
AEA69828.1 | AEA69724.1 | PSEBR_a3492 | PSEBR_a3401 | Putative dehydrogenase. | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | 0.901 |
AEA69828.1 | AEA69919.1 | PSEBR_a3492 | PSEBR_a3580 | Putative dehydrogenase. | Isocitrate lyase. | 0.913 |
AEA69828.1 | AEA70088.1 | PSEBR_a3492 | PSEBR_a3736 | Putative dehydrogenase. | Glycolate oxidase, subunit D. | 0.906 |
AEA69828.1 | AEA70089.1 | PSEBR_a3492 | PSEBR_a3737 | Putative dehydrogenase. | Glycolate oxidase, subunit E. | 0.906 |
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