STRINGSTRING
PSEBR_a96 PSEBR_a96 AEA71158.1 AEA71158.1 AEA72012.1 AEA72012.1 AEA71230.1 AEA71230.1 AEA67987.1 AEA67987.1 AEA67962.1 AEA67962.1 AEA71805.1 AEA71805.1 AEA71103.1 AEA71103.1 AEA71946.1 AEA71946.1 AEA67528.1 AEA67528.1 AEA67680.1 AEA67680.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEBR_a96Conserved hypothetical protein. (216 aa)    
Predicted Functional Partners:
AEA71158.1
Conserved hypothetical protein.
  
     0.773
AEA72012.1
Conserved hypothetical protein.
  
     0.773
AEA71230.1
Conserved hypothetical protein.
  
     0.765
AEA67987.1
Putative response regulator, RsbU family.
  
     0.762
AEA67962.1
Conserved hypothetical protein.
  
     0.755
AEA71805.1
Putative signal transducer, CheW.
  
     0.753
AEA71103.1
Conserved hypothetical protein.
  
     0.743
AEA71946.1
Conserved hypothetical protein.
  
     0.743
AEA67528.1
Anti-sigma factor MucA.
  
     0.725
AEA67680.1
Putative Phosphotransfer protein.
  
     0.710
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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