STRINGSTRING
PSEBR_a97 PSEBR_a97 PSEBR_a98 PSEBR_a98 AEA71198.1 AEA71198.1 AEA66229.1 AEA66229.1 AEA68671.1 AEA68671.1 AEA69932.1 AEA69932.1 AEA71055.1 AEA71055.1 AEA70571.1 AEA70571.1 AEA71310.1 AEA71310.1 sbcD sbcD acpP acpP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PSEBR_a97Putative transporter. (508 aa)    
Predicted Functional Partners:
PSEBR_a98
Carbonate dehydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 0.986
AEA71198.1
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 0.834
AEA66229.1
Conserved hypothetical protein.
   
   0.651
AEA68671.1
Putative peptide synthase.
 
 
 0.605
AEA69932.1
NADH-quinone oxidoreductase subunit M.
  
 
 0.579
AEA71055.1
Putative ubiquinol--cytochrome C reductase, cytochrome B subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.550
AEA70571.1
Conserved hypothetical protein.
    
 
 0.540
AEA71310.1
Conserved hypothetical protein.
    
 
 0.540
sbcD
Nuclease sbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
  
   0.539
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.520
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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