STRINGSTRING
PSEBR_a98 PSEBR_a98 PSEBR_a97 PSEBR_a97 AEA71198.1 AEA71198.1 AEA71777.1 AEA71777.1 AEA66846.1 AEA66846.1 AEA66233.1 AEA66233.1 AEA70949.1 AEA70949.1 AEA71160.1 AEA71160.1 PSEBR_a99 PSEBR_a99 apt apt AEA68671.1 AEA68671.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PSEBR_a98Carbonate dehydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (243 aa)    
Predicted Functional Partners:
PSEBR_a97
Putative transporter.
  
 0.986
AEA71198.1
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
  
 
0.917
AEA71777.1
Conserved hypothetical protein.
  
  
 0.790
AEA66846.1
Putative sulphate transporter.
  
 0.597
AEA66233.1
Putative carbonate dehydratase.
    
 
 0.590
AEA70949.1
Conserved hypothetical protein.
    
 
 0.590
AEA71160.1
Putative sulfate transporter.
 
  
 0.590
PSEBR_a99
Conserved hypothetical protein.
       0.533
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
  
 0.484
AEA68671.1
Putative peptide synthase.
 
  
 0.449
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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