STRINGSTRING
bfrB bfrB PSEEN4905 PSEEN4905 hemH hemH bfrA bfrA PSEEN1837 PSEEN1837 PSEEN4423 PSEEN4423 PSEEN1205 PSEEN1205 PSEEN3205 PSEEN3205 PSEEN3695 PSEEN3695 PSEEN3811 PSEEN3811 acnA acnA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bfrBBacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (157 aa)    
Predicted Functional Partners:
PSEEN4905
Putative bacterioferritin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier.
  
  
  0.930
hemH
Ferrochelatase (Protoheme ferro-lyase); Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.913
bfrA
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
 
  
0.912
PSEEN1837
Putative heme oxygenase BphO; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
     
 0.901
PSEEN4423
Heme oxygenase; Function of strongly homologous gene; enzyme.
     
 0.901
PSEEN1205
Putative bacterioferritin-associated ferredoxin Bfd; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor.
 
 
 0.898
PSEEN3205
Putative sensor histidine kinase/response regulator (hybrid); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
   
  
 0.735
PSEEN3695
Putative anti-anti-sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
   
  
 0.463
PSEEN3811
Putative anti-sigma F factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
   
  
 0.463
acnA
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
   
  
 0.423
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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