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PSEEN1218 PSEEN1218 PSEEN1219 PSEEN1219 rnfG rnfG rnfD rnfD PSEEN1215 PSEEN1215 rnfH rnfH nth nth metG metG sspB sspB hcnA hcnA PSEEN1828 PSEEN1828
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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PSEEN1218Putative lectron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. (254 aa)    
Predicted Functional Partners:
PSEEN1219
Putative electron transport complex protein RnfA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier; Belongs to the NqrDE/RnfAE family.
 
 
 0.986
rnfG
Putative electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
 
 
 0.984
rnfD
Putative electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
 
 0.980
PSEEN1215
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.932
rnfH
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0125 (RnfH) family.
 
   
 0.831
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
  
  
 0.796
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
     0.750
sspB
Stringent starvation protein B; Function of strongly homologous gene; phenotype.
  
     0.639
hcnA
Hydrogen cyanide synthase HcnA; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 
 0.590
PSEEN1828
Putative formate dehydrogenase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
   
 
 0.530
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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