node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PSEEN0754 | PSEEN1997 | PSEEN0754 | PSEEN1997 | Hypothetical protein; No homology to any previously reported sequences. | Putative ATP-dependent DNA helicase, RecQ-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.540 |
PSEEN0754 | PSEEN4176 | PSEEN0754 | PSEEN4176 | Hypothetical protein; No homology to any previously reported sequences. | Putative phage protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. | 0.746 |
PSEEN0754 | dinG | PSEEN0754 | PSEEN1273 | Hypothetical protein; No homology to any previously reported sequences. | Putative ATP-dependent DNA helicase; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.890 |
PSEEN0754 | dnaN | PSEEN0754 | PSEEN0002 | Hypothetical protein; No homology to any previously reported sequences. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.477 |
PSEEN0754 | polA | PSEEN0754 | PSEEN0076 | Hypothetical protein; No homology to any previously reported sequences. | DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.942 |
PSEEN0754 | rpoA | PSEEN0754 | PSEEN0514 | Hypothetical protein; No homology to any previously reported sequences. | RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.926 |
PSEEN0754 | rpoB | PSEEN0754 | PSEEN0482 | Hypothetical protein; No homology to any previously reported sequences. | RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.930 |
PSEEN0754 | rpoZ | PSEEN0754 | PSEEN5446 | Hypothetical protein; No homology to any previously reported sequences. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.925 |
PSEEN1997 | PSEEN0754 | PSEEN1997 | PSEEN0754 | Putative ATP-dependent DNA helicase, RecQ-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.540 |
PSEEN1997 | dinG | PSEEN1997 | PSEEN1273 | Putative ATP-dependent DNA helicase, RecQ-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Putative ATP-dependent DNA helicase; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.677 |
PSEEN1997 | dnaN | PSEEN1997 | PSEEN0002 | Putative ATP-dependent DNA helicase, RecQ-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.931 |
PSEEN1997 | holB | PSEEN1997 | PSEEN1625 | Putative ATP-dependent DNA helicase, RecQ-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | DNA polymerase III, delta prime subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.719 |
PSEEN1997 | polA | PSEEN1997 | PSEEN0076 | Putative ATP-dependent DNA helicase, RecQ-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.972 |
PSEEN1997 | rpoA | PSEEN1997 | PSEEN0514 | Putative ATP-dependent DNA helicase, RecQ-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.528 |
PSEEN1997 | rpoB | PSEEN1997 | PSEEN0482 | Putative ATP-dependent DNA helicase, RecQ-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.775 |
PSEEN1997 | sbcD | PSEEN1997 | PSEEN1722 | Putative ATP-dependent DNA helicase, RecQ-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.948 |
PSEEN4176 | PSEEN0754 | PSEEN4176 | PSEEN0754 | Putative phage protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. | Hypothetical protein; No homology to any previously reported sequences. | 0.746 |
PSEEN4176 | dinG | PSEEN4176 | PSEEN1273 | Putative phage protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. | Putative ATP-dependent DNA helicase; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.650 |
PSEEN4176 | rpoA | PSEEN4176 | PSEEN0514 | Putative phage protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. | RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.797 |
PSEEN4176 | rpoB | PSEEN4176 | PSEEN0482 | Putative phage protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. | RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.821 |