STRINGSTRING
rbsD rbsD rbsK rbsK PSEEN1954 PSEEN1954 PSEEN1953 PSEEN1953 PSEEN1952 PSEEN1952 PSEEN1955 PSEEN1955 PSEEN3405 PSEEN3405 mtlZ mtlZ PSEEN1958 PSEEN1958 glpK glpK PSEEN0931 PSEEN0931
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rbsDPutative ribose ABC transporter, periplasmic ribose-binding protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (134 aa)    
Predicted Functional Partners:
rbsK
Putative ribokinase RbsK; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 
 0.993
PSEEN1954
Putative ribose ABC transporter, permease protein RbsC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.990
PSEEN1953
Putative ribose ABC transporter, ATP-binding protein RbsA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.989
PSEEN1952
Putative ribose ABC transporter, periplasmic ribose-binding protein RbsB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
  
 0.974
PSEEN1955
Putative ribose operon repressor RbsR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
  
 0.896
PSEEN3405
Putative periplasmic sugar-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
  
 0.823
mtlZ
Fructokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.790
PSEEN1958
Putative inosine-uridine preferring nucleoside hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the IUNH family.
     
 0.651
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.502
PSEEN0931
Putative fructose transport system repressor FruR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
  
 0.495
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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