STRINGSTRING
PSEEN3161 PSEEN3161 PSEEN2941 PSEEN2941 PSEEN4959 PSEEN4959 ppiC-1 ppiC-1 PSEEN2824 PSEEN2824 PSEEN2940 PSEEN2940 PSEEN1194 PSEEN1194 PSEEN3550 PSEEN3550 PSEEN3009 PSEEN3009 PSEEN1058 PSEEN1058 PSEEN2839 PSEEN2839
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN3161Putative outer membrane autotransporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter. (722 aa)    
Predicted Functional Partners:
PSEEN2941
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.638
PSEEN4959
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.622
ppiC-1
Peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
 0.613
PSEEN2824
Putative curlin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor.
  
     0.593
PSEEN2940
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.588
PSEEN1194
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.587
PSEEN3550
Hypothetical protein; No homology to any previously reported sequences.
  
     0.579
PSEEN3009
Hypothetical protein; No homology to any previously reported sequences.
  
     0.577
PSEEN1058
Putative porin, OprD family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
  
 0.576
PSEEN2839
Putative curli fiber operon CsgE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
     0.575
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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