STRINGSTRING
PSEEN3682 PSEEN3682 spoOJ spoOJ PSEEN3683 PSEEN3683 PSEEN3789 PSEEN3789 PSEEN2140 PSEEN2140 birA birA topA topA dnaA dnaA ftsZ ftsZ ftsK ftsK PSEEN3684 PSEEN3684
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PSEEN3682Conserved hypothetical protein; Gene remnant. (325 aa)    
Predicted Functional Partners:
spoOJ
Chromosomal partitioning protein ParB; Function of strongly homologous gene; enzyme; Belongs to the ParB family.
 
 
 0.852
PSEEN3683
Hypothetical protein; No homology to any previously reported sequences.
 
   
 0.744
PSEEN3789
Putative ATPase, ParA family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.654
PSEEN2140
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.580
birA
Putative biotin-[acetylCoA carboxylase] holoenzyme synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
     
 0.513
topA
DNA topoisomerase type I, omega protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, th [...]
     
 0.492
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.
 
 
 0.450
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.433
ftsK
Cell division protein FtsK; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.419
PSEEN3684
Hypothetical protein; No homology to any previously reported sequences.
       0.410
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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