STRINGSTRING
PSEEN4036 PSEEN4036 PSEEN0232 PSEEN0232 PSEEN2136 PSEEN2136 PSEEN4012 PSEEN4012 PSEEN4034 PSEEN4034 rnd rnd PSEEN4037 PSEEN4037 PSEEN2686 PSEEN2686 PSEEN4459 PSEEN4459 PSEEN4033 PSEEN4033 glpM glpM
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN4036Putative transmembrane sulfatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (545 aa)    
Predicted Functional Partners:
PSEEN0232
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.905
PSEEN2136
Putative Aspartyl/Asparaginyl beta-hydroxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
     
 0.905
PSEEN4012
Putative aspartyl/Asparaginyl beta-hydroxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
     
 0.905
PSEEN4034
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.615
rnd
Ribonuclease D, processes tRNA; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.
       0.555
PSEEN4037
Putative 5-carboxymethyl-2-hydroxymuconate delta isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.488
PSEEN2686
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.433
PSEEN4459
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.427
PSEEN4033
Putative D-isomer specific 2-hydroxyacid dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.424
glpM
Membrane protein required for efficient alginate biosynthesis; Function of homologous gene experimentally demonstrated in an other organism; membrane component.
  
     0.419
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.