STRINGSTRING
rlmJ rlmJ putP putP PSEEN4993 PSEEN4993 PSEEN4994 PSEEN4994 PSEEN4995 PSEEN4995 PSEEN4996 PSEEN4996 rlmL rlmL PSEEN4992 PSEEN4992
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
rlmJConserved hypothetical protein; Specifically methylates the adenine in position 2030 of 23S rRNA. (278 aa)    
Predicted Functional Partners:
putP
Major sodium:proline symporter (SSS family); Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.477
PSEEN4993
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.475
PSEEN4994
Conserved hypothetical protein, Mig14 family; Homologs of previously reported genes of unknown function.
       0.475
PSEEN4995
Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.475
PSEEN4996
Carbamoyltransferase, NodU family; Function of strongly homologous gene; enzyme.
       0.462
rlmL
Putative methylase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.
 
   
 0.458
PSEEN4992
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.447
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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