STRINGSTRING
PSEEN5227 PSEEN5227 PSEEN5228 PSEEN5228 PSEEN2226 PSEEN2226 PSEEN5226 PSEEN5226 PSEEN3077 PSEEN3077 PSEEN4797 PSEEN4797 PSEEN2845 PSEEN2845 sotB sotB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN5227Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (72 aa)    
Predicted Functional Partners:
PSEEN5228
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.634
PSEEN2226
Putative site-specific recombinase, integrase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin; Belongs to the 'phage' integrase family.
  
     0.631
PSEEN5226
Copper-containing nitrite reductase (NO-forming); Function of strongly homologous gene; enzyme; Belongs to the multicopper oxidase family.
       0.556
PSEEN3077
Putative clp protease (protease subunit); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.532
PSEEN4797
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.439
PSEEN2845
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.420
sotB
Sugar exporter, MFS family; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family.
  
     0.419
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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