Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERI04270.1 | ERI04271.1 | HMPREF0083_06104 | HMPREF0083_06105 | Hypothetical protein; KEGG: pfe:PSF113_0203 6.9e-50 heme oxygenase-like protein; Psort location: Cytoplasmic, score: 7.50. | acyl-CoA thioester hydrolase, YbgC/YbaW family; KEGG: bpf:BpOF4_12410 4.4e-32 hypothetical protein; K07107 acyl-CoA thioester hydrolase; Psort location: Cytoplasmic, score: 7.50. | 0.467 |
ERI04270.1 | ERI04272.1 | HMPREF0083_06104 | HMPREF0083_06106 | Hypothetical protein; KEGG: pfe:PSF113_0203 6.9e-50 heme oxygenase-like protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; KEGG: sca:Sca_1242 0.0091 hisS; histidyl-tRNA synthetase K01892. | 0.467 |
ERI04271.1 | ERI04270.1 | HMPREF0083_06105 | HMPREF0083_06104 | acyl-CoA thioester hydrolase, YbgC/YbaW family; KEGG: bpf:BpOF4_12410 4.4e-32 hypothetical protein; K07107 acyl-CoA thioester hydrolase; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; KEGG: pfe:PSF113_0203 6.9e-50 heme oxygenase-like protein; Psort location: Cytoplasmic, score: 7.50. | 0.467 |
ERI04271.1 | ERI04272.1 | HMPREF0083_06105 | HMPREF0083_06106 | acyl-CoA thioester hydrolase, YbgC/YbaW family; KEGG: bpf:BpOF4_12410 4.4e-32 hypothetical protein; K07107 acyl-CoA thioester hydrolase; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; KEGG: sca:Sca_1242 0.0091 hisS; histidyl-tRNA synthetase K01892. | 0.773 |
ERI04272.1 | ERI04270.1 | HMPREF0083_06106 | HMPREF0083_06104 | Hypothetical protein; KEGG: sca:Sca_1242 0.0091 hisS; histidyl-tRNA synthetase K01892. | Hypothetical protein; KEGG: pfe:PSF113_0203 6.9e-50 heme oxygenase-like protein; Psort location: Cytoplasmic, score: 7.50. | 0.467 |
ERI04272.1 | ERI04271.1 | HMPREF0083_06106 | HMPREF0083_06105 | Hypothetical protein; KEGG: sca:Sca_1242 0.0091 hisS; histidyl-tRNA synthetase K01892. | acyl-CoA thioester hydrolase, YbgC/YbaW family; KEGG: bpf:BpOF4_12410 4.4e-32 hypothetical protein; K07107 acyl-CoA thioester hydrolase; Psort location: Cytoplasmic, score: 7.50. | 0.773 |