Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KXB67348.1 | KXB67349.1 | HMPREF1863_00535 | HMPREF1863_00536 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.979 |
| KXB67348.1 | KXB67908.1 | HMPREF1863_00535 | HMPREF1863_00417 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | RNA polymerase sigma factor, sigma-70 family; KEGG: pfe:PSF113_1585 6.1e-06 fliA; protein FliA K02405; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. | 0.481 |
| KXB67349.1 | KXB67348.1 | HMPREF1863_00536 | HMPREF1863_00535 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.979 |
| KXB67349.1 | KXB67908.1 | HMPREF1863_00536 | HMPREF1863_00417 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | RNA polymerase sigma factor, sigma-70 family; KEGG: pfe:PSF113_1585 6.1e-06 fliA; protein FliA K02405; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. | 0.471 |
| KXB67907.1 | KXB67908.1 | HMPREF1863_00416 | HMPREF1863_00417 | KEGG: nth:Nther_2544 2.6e-43 N-acetylmuramoyl-L-alanine amidase family 2 protein; K01447 N-acetylmuramoyl-L-alanine amidase. | RNA polymerase sigma factor, sigma-70 family; KEGG: pfe:PSF113_1585 6.1e-06 fliA; protein FliA K02405; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. | 0.775 |
| KXB67907.1 | KXB67909.1 | HMPREF1863_00416 | HMPREF1863_00418 | KEGG: nth:Nther_2544 2.6e-43 N-acetylmuramoyl-L-alanine amidase family 2 protein; K01447 N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.561 |
| KXB67907.1 | KXB67910.1 | HMPREF1863_00416 | HMPREF1863_00419 | KEGG: nth:Nther_2544 2.6e-43 N-acetylmuramoyl-L-alanine amidase family 2 protein; K01447 N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.561 |
| KXB67907.1 | KXB67911.1 | HMPREF1863_00416 | HMPREF1863_00420 | KEGG: nth:Nther_2544 2.6e-43 N-acetylmuramoyl-L-alanine amidase family 2 protein; K01447 N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.554 |
| KXB67908.1 | KXB67348.1 | HMPREF1863_00417 | HMPREF1863_00535 | RNA polymerase sigma factor, sigma-70 family; KEGG: pfe:PSF113_1585 6.1e-06 fliA; protein FliA K02405; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.481 |
| KXB67908.1 | KXB67349.1 | HMPREF1863_00417 | HMPREF1863_00536 | RNA polymerase sigma factor, sigma-70 family; KEGG: pfe:PSF113_1585 6.1e-06 fliA; protein FliA K02405; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.471 |
| KXB67908.1 | KXB67907.1 | HMPREF1863_00417 | HMPREF1863_00416 | RNA polymerase sigma factor, sigma-70 family; KEGG: pfe:PSF113_1585 6.1e-06 fliA; protein FliA K02405; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. | KEGG: nth:Nther_2544 2.6e-43 N-acetylmuramoyl-L-alanine amidase family 2 protein; K01447 N-acetylmuramoyl-L-alanine amidase. | 0.775 |
| KXB67908.1 | KXB67909.1 | HMPREF1863_00417 | HMPREF1863_00418 | RNA polymerase sigma factor, sigma-70 family; KEGG: pfe:PSF113_1585 6.1e-06 fliA; protein FliA K02405; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. | Hypothetical protein. | 0.561 |
| KXB67908.1 | KXB67910.1 | HMPREF1863_00417 | HMPREF1863_00419 | RNA polymerase sigma factor, sigma-70 family; KEGG: pfe:PSF113_1585 6.1e-06 fliA; protein FliA K02405; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.561 |
| KXB67908.1 | KXB67911.1 | HMPREF1863_00417 | HMPREF1863_00420 | RNA polymerase sigma factor, sigma-70 family; KEGG: pfe:PSF113_1585 6.1e-06 fliA; protein FliA K02405; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. | Hypothetical protein. | 0.554 |
| KXB67908.1 | rpoA | HMPREF1863_00417 | HMPREF1863_01431 | RNA polymerase sigma factor, sigma-70 family; KEGG: pfe:PSF113_1585 6.1e-06 fliA; protein FliA K02405; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.652 |
| KXB67908.1 | rpoB | HMPREF1863_00417 | HMPREF1863_00870 | RNA polymerase sigma factor, sigma-70 family; KEGG: pfe:PSF113_1585 6.1e-06 fliA; protein FliA K02405; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.758 |
| KXB67908.1 | rpoC | HMPREF1863_00417 | HMPREF1863_00869 | RNA polymerase sigma factor, sigma-70 family; KEGG: pfe:PSF113_1585 6.1e-06 fliA; protein FliA K02405; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.768 |
| KXB67908.1 | rpoZ | HMPREF1863_00417 | HMPREF1863_01625 | RNA polymerase sigma factor, sigma-70 family; KEGG: pfe:PSF113_1585 6.1e-06 fliA; protein FliA K02405; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.710 |
| KXB67909.1 | KXB67907.1 | HMPREF1863_00418 | HMPREF1863_00416 | Hypothetical protein. | KEGG: nth:Nther_2544 2.6e-43 N-acetylmuramoyl-L-alanine amidase family 2 protein; K01447 N-acetylmuramoyl-L-alanine amidase. | 0.561 |
| KXB67909.1 | KXB67908.1 | HMPREF1863_00418 | HMPREF1863_00417 | Hypothetical protein. | RNA polymerase sigma factor, sigma-70 family; KEGG: pfe:PSF113_1585 6.1e-06 fliA; protein FliA K02405; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. | 0.561 |
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