STRINGSTRING
Hden_1953 Hden_1953 Hden_2078 Hden_2078 Hden_1769 Hden_1769 Hden_1436 Hden_1436
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hden_1953PFAM: Domain of unknown function DUF1993; KEGG: pap:PSPA7_0055 hypothetical protein. (167 aa)    
Predicted Functional Partners:
Hden_2078
PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_4787 putative glutathione S-transferase (GST).
  
     0.529
Hden_1769
PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ank:AnaeK_3374 glutathione-dependent formaldehyde-activating GFA.
  
     0.467
Hden_1436
PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mes:Meso_0968 glutathione-dependent formaldehyde-activating, GFA.
  
     0.400
Your Current Organism:
Hyphomicrobium denitrificans ATCC 51888
NCBI taxonomy Id: 582899
Other names: H. denitrificans ATCC 51888, Hyphomicrobium denitrificans str. ATCC 51888, Hyphomicrobium denitrificans strain ATCC 51888
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