STRINGSTRING
ACV34011.1 ACV34011.1 ACV34105.1 ACV34105.1 aceK aceK ACV36368.1 ACV36368.1 ACV34104.1 ACV34104.1 ACV35141.1 ACV35141.1 ACV37435.1 ACV37435.1 ACV37436.1 ACV37436.1 ACV35143.1 ACV35143.1 ACV37437.1 ACV37437.1 msbA msbA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ACV34011.1PFAM: SdiA-regulated domain protein; KEGG: pap:PSPA7_0412 putative transcriptional regulator. (308 aa)    
Predicted Functional Partners:
ACV34105.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ppf:Pput_0942 methyltransferase type 11.
  
   
 0.802
aceK
(Isocitrate dehydrogenase (NADP(+))) kinase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.
       0.775
ACV36368.1
PFAM: LmbE family protein; KEGG: pmy:Pmen_0596 LmbE family protein.
  
     0.774
ACV34104.1
PFAM: lipopolysaccharide kinase; KEGG: pst:PSPTO_4998 lipopolysaccharide biosynthesis protein, putative.
 
   
 0.768
ACV35141.1
PFAM: lipopolysaccharide kinase; KEGG: azo:azo3569 lipopolysaccharide core biosynthesis protein.
  
     0.757
ACV37435.1
KEGG: eba:ebA3993 conserved hypothetical protein, predicted protein kinase family.
  
     0.749
ACV37436.1
Lipopolysaccharide kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
  
     0.734
ACV35143.1
PFAM: lipopolysaccharide kinase; KEGG: pap:PSPA7_5743 hypothetical protein.
  
     0.724
ACV37437.1
PFAM: glycosyl transferase group 1; KEGG: eba:ebA3996 UDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase.
  
     0.698
msbA
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
     0.596
Your Current Organism:
Accumulibacter phosphatis
NCBI taxonomy Id: 522306
Other names: Accumulibacter phosphatis UW-1, C. Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis Type IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA strain UW-1
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