Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bcop_0435 | Bcop_1353 | COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: bth:BT_2800 putative amidophosphoribosyl-transferase; PFAM: Phosphoribosyltransferase; SPTR: Predicted amidophosphoribosyltransferases; IMG reference gene:2504106099; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein. | KEGG: pap:PSPA7_0518 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107062. | 0.410 |
Bcop_1057 | Bcop_1353 | COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR002872:IPR015590; KEGG: bvu:BVU_3604 putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydraogenase; PFAM: Aldehyde dehydrogenase domain; Proline dehydrogenase; SPTR: Putative uncharacterized protein; IMG reference gene:2504106759; PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family. | KEGG: pap:PSPA7_0518 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107062. | 0.498 |
Bcop_1057 | Bcop_2386 | COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR002872:IPR015590; KEGG: bvu:BVU_3604 putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydraogenase; PFAM: Aldehyde dehydrogenase domain; Proline dehydrogenase; SPTR: Putative uncharacterized protein; IMG reference gene:2504106759; PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family. | COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR011895:IPR002880:IPR019752:IPR019456:IPR 001450:IPR011766; KEGG: bth:BT_1747 pyruvate-flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Pyruvate dehydrogenase (NADP(+)); SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain; SPTR: Pyru [...] | 0.999 |
Bcop_1352 | Bcop_1353 | Hypothetical protein; KEGG: bvu:BVU_1175 putative hemolysin; SPTR: Putative hemolysin; IMG reference gene:2504107061. | KEGG: pap:PSPA7_0518 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107062. | 0.447 |
Bcop_1353 | Bcop_0435 | KEGG: pap:PSPA7_0518 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107062. | COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: bth:BT_2800 putative amidophosphoribosyl-transferase; PFAM: Phosphoribosyltransferase; SPTR: Predicted amidophosphoribosyltransferases; IMG reference gene:2504106099; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein. | 0.410 |
Bcop_1353 | Bcop_1057 | KEGG: pap:PSPA7_0518 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107062. | COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR002872:IPR015590; KEGG: bvu:BVU_3604 putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydraogenase; PFAM: Aldehyde dehydrogenase domain; Proline dehydrogenase; SPTR: Putative uncharacterized protein; IMG reference gene:2504106759; PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family. | 0.498 |
Bcop_1353 | Bcop_1352 | KEGG: pap:PSPA7_0518 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107062. | Hypothetical protein; KEGG: bvu:BVU_1175 putative hemolysin; SPTR: Putative hemolysin; IMG reference gene:2504107061. | 0.447 |
Bcop_1353 | Bcop_2386 | KEGG: pap:PSPA7_0518 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107062. | COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR011895:IPR002880:IPR019752:IPR019456:IPR 001450:IPR011766; KEGG: bth:BT_1747 pyruvate-flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Pyruvate dehydrogenase (NADP(+)); SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain; SPTR: Pyru [...] | 0.580 |
Bcop_2386 | Bcop_1057 | COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR011895:IPR002880:IPR019752:IPR019456:IPR 001450:IPR011766; KEGG: bth:BT_1747 pyruvate-flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Pyruvate dehydrogenase (NADP(+)); SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain; SPTR: Pyru [...] | COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR002872:IPR015590; KEGG: bvu:BVU_3604 putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydraogenase; PFAM: Aldehyde dehydrogenase domain; Proline dehydrogenase; SPTR: Putative uncharacterized protein; IMG reference gene:2504106759; PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family. | 0.999 |
Bcop_2386 | Bcop_1353 | COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR011895:IPR002880:IPR019752:IPR019456:IPR 001450:IPR011766; KEGG: bth:BT_1747 pyruvate-flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Pyruvate dehydrogenase (NADP(+)); SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain; SPTR: Pyru [...] | KEGG: pap:PSPA7_0518 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107062. | 0.580 |