STRINGSTRING
EIJ33963.1 EIJ33963.1 EIJ33964.1 EIJ33964.1 EIJ33966.1 EIJ33966.1 EIJ33962.1 EIJ33962.1 EIJ33960.1 EIJ33960.1 EIJ33959.1 EIJ33959.1 EIJ33961.1 EIJ33961.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ33963.1PFAM: SpoVR like protein; COGs: COG2719 conserved hypothetical protein; InterPro IPR007390; KEGG: pap:PSPA7_0729 SpoVR family protein; PFAM: Sporulation stage V, protein R; SPTR: Putative uncharacterized protein. (511 aa)    
Predicted Functional Partners:
EIJ33964.1
UPF0229 protein yeaH; PFAM: Protein of unknown function (DUF444); COGs: COG2718 conserved hypothetical protein; HAMAP: UPF0229 protein yeaH; InterPro IPR006698; KEGG: avn:Avin_46880 hypothetical protein; PFAM: Protein of unknown function DUF444; SPTR: UPF0229 protein Avin_46880.
 
  
 0.995
EIJ33966.1
PFAM: PrkA AAA domain; COGs: COG2766 Putative Ser protein kinase; InterPro IPR013153; KEGG: pmk:MDS_4355 putative serine protein kinase, PrkA; PFAM: PrkA AAA; SMART: PrkA AAA; SPTR: Putative serine protein kinase, PrkA.
 
  
 0.982
EIJ33962.1
KEGG: gca:Galf_1999 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.752
EIJ33960.1
PFAM: Bacterial domain of unknown function (DUF403); COGs: COG2307 conserved hypothetical protein; InterPro IPR007296; KEGG: tgr:Tgr7_1013 hypothetical protein; PFAM: Protein of unknown function DUF403, bacteria; SPTR: Putative uncharacterized protein.
  
    0.457
EIJ33959.1
Protein of unknown function DUF2126; PFAM: Bacterial transglutaminase-like N-terminal region; Transglutaminase-like superfamily; Putative amidoligase enzyme (DUF2126); COGs: COG4196 conserved hypothetical protein; InterPro IPR013589:IPR002931:IPR018667; KEGG: tgr:Tgr7_1014 transglutaminase; PFAM: Protein of unknown function DUF2126; Bacterial transglutaminase-like, N-terminal; Transglutaminase-like; SMART: Transglutaminase-like; SPTR: Transglutaminase domain protein.
  
    0.455
EIJ33961.1
PFAM: Domain of unknown function (DUF404); Domain of unknown function (DUF407); COGs: COG2308 conserved hypothetical protein; InterPro IPR007297:IPR007302; KEGG: maq:Maqu_3035 hypothetical protein; PFAM: Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; SPTR: Putative uncharacterized protein.
       0.448
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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