STRINGSTRING
Psta_1465 Psta_1465 Psta_1464 Psta_1464 Psta_1462 Psta_1462 Psta_1463 Psta_1463 Psta_1114 Psta_1114 Psta_4608 Psta_4608 Psta_0022 Psta_0022 Psta_0173 Psta_0173 Psta_1466 Psta_1466 Psta_1467 Psta_1467 rpsK rpsK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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[Homology]
Score
Psta_1465Hypothetical protein; KEGG: pap:PSPA7_0769 putative tail length determinator protein. (860 aa)    
Predicted Functional Partners:
Psta_1464
PFAM: peptidase M48 Ste24p; KEGG: hypothetical protein.
 
  
 0.938
Psta_1462
PFAM: Dynamin family protein; KEGG: sfu:Sfum_2910 dynamin family protein.
 
    
0.839
Psta_1463
KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family.
       0.773
Psta_1114
Hypothetical protein.
  
 0.716
Psta_4608
Hypothetical protein.
  
 0.716
Psta_0022
PFAM: peptidase M48 Ste24p; peptidase M56 BlaR1; KEGG: sfu:Sfum_0005 tetratricopeptide TPR_2 repeat protein.
     
 0.702
Psta_0173
Hypothetical protein; KEGG: hch:HCH_01488 Zn-dependent protease with chaperone function.
     
 0.702
Psta_1466
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rpc:RPC_2994 sigma-24 (FecI-like).
       0.675
Psta_1467
KEGG: hypothetical protein.
       0.675
rpsK
Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
    
  0.653
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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