STRINGSTRING
Msil_2413 Msil_2413 Msil_2412 Msil_2412 Msil_2620 Msil_2620 Msil_2414 Msil_2414 Msil_1478 Msil_1478 Msil_1821 Msil_1821 Msil_2415 Msil_2415 Msil_3545 Msil_3545
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Msil_2413PFAM: Ethanolamine ammonia lyase large subunit; KEGG: pap:PSPA7_1082 ethanolamine ammonia-lyase large subunit. (462 aa)    
Predicted Functional Partners:
Msil_2412
PFAM: Ethanolamine ammonia-lyase light chain; KEGG: pfo:PflO1_4992 ethanolamine ammonia-lyase small subunit; Belongs to the EutC family.
 
 0.999
Msil_2620
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: afm:AFUA_6G12240 glycerophosphoryl diester phosphodiesterase family protein.
     
  0.900
Msil_2414
TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: bpy:Bphyt_0020 ethanolamine transproter.
 
  
 0.847
Msil_1478
Acetaldehyde dehydrogenase (acetylating); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
     
  0.499
Msil_1821
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ret:RHE_PC00106 alcohol dehydrogenase protein.
     
  0.499
Msil_2415
KEGG: acr:Acry_1435 hypothetical protein.
       0.465
Msil_3545
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
      
 0.400
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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