STRINGSTRING
AEF23328.1 AEF23328.1 metG metG AEF22058.1 AEF22058.1 AEF20832.1 AEF20832.1 AEF21288.1 AEF21288.1 AEF22134.1 AEF22134.1 AEF22356.1 AEF22356.1 AEF22494.1 AEF22494.1 AEF22555.1 AEF22555.1 AEF22672.1 AEF22672.1 AEF22800.1 AEF22800.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF23328.1KEGG: pap:PSPA7_1643 hypothetical protein. (266 aa)    
Predicted Functional Partners:
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.781
AEF22058.1
KEGG: xcv:XCV0486 putative secreted protein.
  
     0.753
AEF20832.1
TfoX domain-containing protein; PFAM: TfoX, C-terminal; KEGG: pmy:Pmen_0999 TfoX domain-containing protein.
  
     0.630
AEF21288.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: avn:Avin_10480 ECF sigma factor, FecI family; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
  
 
 0.586
AEF22134.1
KEGG: ppg:PputGB1_3282 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
  
 
 0.586
AEF22356.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: pfs:PFLU2787 heme uptake regulator; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.586
AEF22494.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: pfl:PFL_1875 RNA polymerase sigma factor SigX; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.586
AEF22555.1
KEGG: pmy:Pmen_2487 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2.
  
 
 0.586
AEF22672.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: pmy:Pmen_2699 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.586
AEF22800.1
KEGG: psa:PST_4176 ECF subfamily RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
  
 
 0.586
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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