STRINGSTRING
Slin_5595 Slin_5595 Slin_5593 Slin_5593 Slin_5594 Slin_5594 Slin_5596 Slin_5596 Slin_5592 Slin_5592
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5595KEGG: pap:PSPA7_1729 hypothetical protein. (241 aa)    
Predicted Functional Partners:
Slin_5593
Hypothetical protein.
       0.773
Slin_5594
Hypothetical protein; KEGG: mca:MCA1562 ABC transporter, permease protein.
       0.773
Slin_5596
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0826 putative ATP-binding ABC transporter protein.
       0.773
Slin_5592
PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; KEGG: predicted protein; K10563 formamidopyrimidine- DNA glycosylase; Belongs to the FPG family.
       0.501
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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