STRINGSTRING
Rmar_1596 Rmar_1596 hutI hutI Rmar_1594 Rmar_1594 hutU hutU Rmar_2129 Rmar_2129 argG argG Rmar_1443 Rmar_1443 Rmar_1231 Rmar_1231 Rmar_1260 Rmar_1260 Rmar_0257 Rmar_0257 Rmar_1306 Rmar_1306
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Rmar_1596PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: pap:PSPA7_1954 formimidoylglutamase; Belongs to the arginase family. (316 aa)    
Predicted Functional Partners:
hutI
KEGG: rce:RC1_3234 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; Amidohydrolase 3.
 
 
 0.991
Rmar_1594
Histidine ammonia-lyase; KEGG: scl:sce6082 hypothetical protein; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase.
 
  
 0.962
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.874
Rmar_2129
PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: NAD-dependent glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.866
argG
KEGG: mxa:MXAN_5108 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; ExsB family protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 
 0.852
Rmar_1443
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: dal:Dalk_5100 glutamine synthetase, type I.
    
 0.852
Rmar_1231
TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: afw:Anae109_0887 delta-1-pyrroline-5- carboxylate dehydrogenase.
  
 0.837
Rmar_1260
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: acp:A2cp1_0869 glutamate synthase (ferredoxin).
    
 0.833
Rmar_0257
PFAM: aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: Os01g0871300; hypothetical protein.
   
 
 0.830
Rmar_1306
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
     
 0.816
Your Current Organism:
Rhodothermus marinus
NCBI taxonomy Id: 518766
Other names: R. marinus DSM 4252, Rhodothermus marinus DSM 4252, Rhodothermus marinus str. DSM 4252, Rhodothermus marinus strain DSM 4252
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