STRINGSTRING
Fbal_1119 Fbal_1119 Fbal_0361 Fbal_0361 Fbal_0216 Fbal_0216 Fbal_0362 Fbal_0362 Fbal_3473 Fbal_3473 Fbal_2503 Fbal_2503 Fbal_0215 Fbal_0215 Fbal_0363 Fbal_0363 Fbal_3474 Fbal_3474 Fbal_3483 Fbal_3483 Fbal_1118 Fbal_1118
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbal_1119Competence protein ComEA helix-hairpin-helix repeat protein; COGs: COG1555 DNA uptake protein and related DNA-binding protein; InterPro IPR004509; KEGG: pap:PSPA7_1987 hypothetical protein; SPTR: A0YFD4 Competence protein ComEA helix-hairpin-helix region; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: General secretion pathway protein K; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein. (94 aa)    
Predicted Functional Partners:
Fbal_0361
Type 4 prepilin peptidase 1; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
   
  
 0.802
Fbal_0216
General secretion pathway protein F; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004: IPR018076: IPR001992: IPR011850; KEGG: shn:Shewana3_0153 general secretion pathway protein F; PFAM: Type II secretion system F domain; SPTR: A2V2N8 General secretion pathway protein F; TIGRFAM: general secretion pathway protein F; PFAM: Bacterial type II secretion system protein F domain; TIGRFAM: general secretion pathway protein F.
  
  
 0.711
Fbal_0362
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004: IPR018076: IPR001992; KEGG: shm:Shewmr7_3606 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: A2UYK0 Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain.
  
  
 0.711
Fbal_3473
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004: IPR018076; KEGG: sse:Ssed_0548 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: A2UWE5 Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain.
  
  
 0.711
Fbal_2503
DNA internalization-related competence protein ComEC/Rec2; COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); InterPro IPR001279: IPR004477: IPR004797; KEGG: shn:Shewana3_2585 DNA internalization-related competence protein ComEC/Rec2; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; SPTR: A2V306 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internaliz [...]
  
  
 0.623
Fbal_0215
Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
  
 0.608
Fbal_0363
COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482: IPR007831: IPR013374; KEGG: saz:Sama_0369 type IV pilus biogenesis protein PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SPTR: A2UYJ9 Type IV-A pilus assembly ATPase PilB; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB.
  
  
 0.608
Fbal_3474
COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482: IPR007831: IPR003593; KEGG: slo:Shew_0392 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: A2UWE4 Type II secretion system protein E; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain.
  
  
 0.608
Fbal_3483
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
  
 0.570
Fbal_1118
COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR005835: IPR005771; KEGG: tau:Tola_0934 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; SPTR: A2V1M7 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase.
       0.554
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.