STRINGSTRING
Nhal_3161 Nhal_3161 Nhal_3808 Nhal_3808 Nhal_3489 Nhal_3489 Nhal_3160 Nhal_3160 Nhal_1400 Nhal_1400 Nhal_1781 Nhal_1781 Nhal_3145 Nhal_3145 Nhal_3146 Nhal_3146 Nhal_3081 Nhal_3081 ybeY ybeY truA truA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Nhal_3161PFAM: beta-lactamase domain protein; KEGG: pap:PSPA7_2239 hypothetical protein. (286 aa)    
Predicted Functional Partners:
Nhal_3808
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: noc:Noc_2006 putative oxidoreductase.
 
 
 0.783
Nhal_3489
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pub:SAR11_1282 sarcosine oxidase alpha chain; Belongs to the GcvT family.
  
 0.696
Nhal_3160
Hypothetical protein.
       0.524
Nhal_1400
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; thiamineS protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: aeh:Mlg_1160 molybdopterin biosynthesis protein MoeB.
  
 
 0.474
Nhal_1781
TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: aeh:Mlg_1307 sulfate transporter.
     0.473
Nhal_3145
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mpo:Mpop_4146 protein of unknown function DUF395 YeeE/YedE.
 
     0.468
Nhal_3146
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: azc:AZC_2083 YeeE/YedE family protein.
 
     0.453
Nhal_3081
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: hha:Hhal_0052 AMP-dependent synthetase and ligase.
   
 
 0.438
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.414
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.405
Your Current Organism:
Nitrosococcus halophilus
NCBI taxonomy Id: 472759
Other names: N. halophilus Nc 4, Nitrosococcus halophilus Nc 4, Nitrosococcus halophilus str. Nc 4, Nitrosococcus halophilus strain Nc 4
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