STRINGSTRING
Smal_1500 Smal_1500 Smal_1499 Smal_1499 apaH apaH Smal_1501 Smal_1501 Smal_1595 Smal_1595 Smal_1705 Smal_1705 Smal_2459 Smal_2459 Smal_1690 Smal_1690
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Smal_1500KEGG: pap:PSPA7_2469 esterase/lipase/thioesterase domain-containing protein. (231 aa)    
Predicted Functional Partners:
Smal_1499
PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_4038 transporter, putative.
 
     0.572
apaH
Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.549
Smal_1501
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pau:PA14_33680 ferripyoverdine receptor.
       0.477
Smal_1595
PFAM: lipolytic protein G-D-S-L family; KEGG: pau:PA14_23690 putative secreted protein.
  
    0.438
Smal_1705
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_2480 short-chain dehydrogenase/reductase SDR.
  
    0.437
Smal_2459
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bxe:Bxe_B2639 putative oxygenase.
  
    0.409
Smal_1690
KEGG: fjo:Fjoh_3894 hypothetical protein.
  
     0.405
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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