STRINGSTRING
Bphy_1262 Bphy_1262 Bphy_1263 Bphy_1263 Bphy_1261 Bphy_1261 Bphy_1802 Bphy_1802 Bphy_4895 Bphy_4895 Bphy_3737 Bphy_3737 Bphy_3266 Bphy_3266 Bphy_4737 Bphy_4737 Bphy_4476 Bphy_4476 Bphy_4246 Bphy_4246 Bphy_2480 Bphy_2480
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_1262Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pap:PSPA7_2749 probable transcriptional regulator. (290 aa)    
Predicted Functional Partners:
Bphy_1263
PFAM: Cupin 2 conserved barrel domain protein; KEGG: pae:PA2490 hypothetical protein.
 
 
 
 0.765
Bphy_1261
KEGG: bxe:Bxe_A1972 hypothetical protein.
       0.689
Bphy_1802
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mll0736 probable transcriptional regulator.
  
     0.663
Bphy_4895
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: aci:ACIAD1622 putative transcriptional regulator (AraC family) (nitrilase regulator).
  
     0.661
Bphy_3737
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A3868 transcriptional regulator, AraC family.
 
   0.620
Bphy_3266
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_C1098 transcriptional regulator, AraC family.
 
   0.609
Bphy_4737
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B2087 transcriptional regulator, AraC family.
 
   0.581
Bphy_4476
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A3868 transcriptional regulator, AraC family.
 
   0.574
Bphy_4246
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B3004 transcriptional regulator, AraC family.
 
   0.566
Bphy_2480
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A3868 transcriptional regulator, AraC family.
 
   0.562
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.