STRINGSTRING
Ndas_5030 Ndas_5030 Ndas_5031 Ndas_5031 Ndas_5032 Ndas_5032 Ndas_1028 Ndas_1028 Ndas_1751 Ndas_1751 Ndas_1026 Ndas_1026 Ndas_1746 Ndas_1746 Ndas_1741 Ndas_1741 Ndas_1025 Ndas_1025 Ndas_1745 Ndas_1745 Ndas_1761 Ndas_1761
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ndas_5030Isochorismatase; COGs: COG1535 Isochorismate hydrolase; InterPro IPR000868:IPR003881; KEGG: pap:PSPA7_3382 phenazine biosynthesis protein PhzD; PFAM: isochorismatase hydrolase; PRIAM: Isochorismatase; SPTR: C1YID5 Isochorismate hydrolase; PFAM: Isochorismatase family. (207 aa)    
Predicted Functional Partners:
Ndas_5031
Glutamine amidotransferase class-I; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterProIPR017926:IPR011702:IPR006220:IPR001317:IPR 005801:IPR015890:IPR000991; KEGG: pap:PSPA7_3381 phenazine biosynthesis protein PhzE; PFAM: glutamine amidotransferase class-I; Chorismate binding-like; SPTR: C1YID4 Anthranilate/para-aminobenzoate synthase component I; PFAM: Glutamine amidotransferase class-I; chorismate binding enzyme.
 
 
 0.990
Ndas_5032
Phenazine biosynthesis protein PhzF family; COGs: COG0384 epimerase PhzC/PhzF homolog; InterPro IPR003719; KEGG: pag:PLES_34201 putative phenazine biosynthesis protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein; SPTR: C1YID3 Phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family.
  
 
 0.982
Ndas_1028
AMP-dependent synthetase and ligase; COGs: COG1021 Peptide arylation protein; InterPro IPR020845:IPR000873; KEGG: sco:SCO7681 AMP-binding ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YVN1 Peptide arylation enzyme; PFAM: AMP-binding enzyme; TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase.
 
 
 0.969
Ndas_1751
AMP-dependent synthetase and ligase; COGs: COG1021 Peptide arylation protein; InterPro IPR020845:IPR000873; KEGG: sro:Sros_3774 (2,3-dihydroxybenzoyl)adenylate synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YNY2 Peptide arylation enzyme; PFAM: AMP-binding enzyme; TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase.
 
 
 0.968
Ndas_1026
COGs: COG1169 Isochorismate synthase; InterPro IPR004561:IPR015890:IPR005801; KEGG: sen:SACE_3854 isochorismate synthase DhbC; PFAM: Chorismate binding-like; SPTR: C1YVN3 Isochorismate synthase family protein; TIGRFAM: isochorismate synthase; PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases.
 
 
 0.951
Ndas_1746
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR020845:IPR009081:IPR001242:IPR000873:IPR 010071:IPR006163; KEGG: sco:SCO3230 CDA peptide synthetase I; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; SPTR: C1YNY7 Amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain.
 
  
 0.949
Ndas_1741
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR009081:IPR020845:IPR010071:IPR001242:IPR 000873:IPR006163:IPR001031; KEGG: sen:SACE_4287 putative non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Thioesterase; SPTR: C1YNZ2 Amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Thioesterase domain; AMP-binding enzyme; Condensati [...]
 
  
 0.896
Ndas_1025
Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR003560:IPR002198:IPR016040; KEGG: tfu:Tfu_1873 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Q47NR3 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; RBL00455; PFAM: short chain dehydrogenase.
 
 
 0.894
Ndas_1745
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR020459:IPR009081:IPR020845:IPR010071:IPR 000873:IPR006163; KEGG: tfu:Tfu_1865 amino acid adenylation; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; SPTR: C1YNY8 Amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.879
Ndas_1761
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR020845:IPR009081:IPR001242:IPR000873:IPR 006162:IPR013217:IPR001031:IPR006163:IPR020459:IPR010071:I PR013624; KEGG: sro:Sros_3767 pyochelin synthetase F; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; Methyltransferase type 12; Thioesterase; phosphopantetheine-binding; Non-ribosomal peptide synthetase; SPTR: C1YNX2 Amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation domain protein; PFAM: Phos [...]
 
  
 0.878
Your Current Organism:
Nocardiopsis dassonvillei
NCBI taxonomy Id: 446468
Other names: N. dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei str. DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.