STRINGSTRING
Smal_2424 Smal_2424 Smal_3391 Smal_3391 Smal_2006 Smal_2006 Smal_0502 Smal_0502 Smal_2425 Smal_2425 Smal_0501 Smal_0501
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smal_2424PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pap:PSPA7_4051 probable oxidoreductase. (371 aa)    
Predicted Functional Partners:
Smal_3391
PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: reh:H16_B2164 NADH:flavin oxidoreductase.
  
  
 
0.906
Smal_2006
PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ent:Ent638_2277 NADH:flavin oxidoreductase/NADH oxidase.
  
  
 
0.905
Smal_0502
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: xac:XAC3586 electron transfer flavoprotein beta subunit.
  
 
 0.581
Smal_2425
LasA; KEGG: pfl:PFL_2383 LasA.
       0.449
Smal_0501
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: xcb:XC_3615 electron transfer flavoprotein alpha subunit.
   
 
 0.403
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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