STRINGSTRING
Rmar_2199 Rmar_2199 Rmar_2200 Rmar_2200 Rmar_2198 Rmar_2198 Rmar_2207 Rmar_2207 Rmar_1436 Rmar_1436 Rmar_2208 Rmar_2208 Rmar_1469 Rmar_1469 Rmar_2658 Rmar_2658 icmF icmF Rmar_1556 Rmar_1556 Rmar_2202 Rmar_2202
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Rmar_2199PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pap:PSPA7_4191 hypothetical protein; Belongs to the CoA-transferase III family. (401 aa)    
Predicted Functional Partners:
Rmar_2200
PFAM: regulatory protein TetR; KEGG: cvi:CV_2091 TetR family transcriptional regulator.
 
    0.813
Rmar_2198
PFAM: Sterol-binding domain protein; KEGG: csa:Csal_1939 sterol-binding.
 
     0.745
Rmar_2207
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: dal:Dalk_2466 acyl-CoA dehydrogenase domain protein.
 
 
 0.674
Rmar_1436
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: nar:Saro_3419 acyl-CoA dehydrogenase domain- containing protein.
 
 0.627
Rmar_2208
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: scl:sce5759 Acyl-CoA dehydrogenase.
 
 
 0.615
Rmar_1469
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: pmy:Pmen_2590 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.607
Rmar_2658
PFAM: pyruvate carboxyltransferase; KEGG: mxa:MXAN_3753 hydroxymethylglutaryl-CoA lyase.
 
  0.597
icmF
Methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
   
 0.580
Rmar_1556
TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: Aldehyde Dehydrogenase; MaoC domain protein dehydratase; KEGG: dsh:Dshi_3827 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase.
  
 0.574
Rmar_2202
PFAM: AMP-dependent synthetase and ligase; KEGG: sil:SPO0801 4-coumarate:CoA ligase.
 
   
 0.570
Your Current Organism:
Rhodothermus marinus
NCBI taxonomy Id: 518766
Other names: R. marinus DSM 4252, Rhodothermus marinus DSM 4252, Rhodothermus marinus str. DSM 4252, Rhodothermus marinus strain DSM 4252
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