STRINGSTRING
EDY18915.1 EDY18915.1 EDY18913.1 EDY18913.1 EDY18914.1 EDY18914.1 secF secF EDY18513.1 EDY18513.1 EDY20379.1 EDY20379.1 EDY16773.1 EDY16773.1 EDY19358.1 EDY19358.1 EDY18910.1 EDY18910.1 EDY18911.1 EDY18911.1 EDY18912.1 EDY18912.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY18915.1SMART: PDZ/DHR/GLGF domain protein; KEGG: pap:PSPA7_4753 serine protease MucD precursor. (338 aa)    
Predicted Functional Partners:
EDY18913.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: afw:Anae109_0250 RNA polymerase, sigma-24 subunit, ECF subfamily.
       0.758
EDY18914.1
Hypothetical protein.
       0.746
secF
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
   
 
 0.671
EDY18513.1
Protease Do; KEGG: hhe:HH0454 serine protease; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein.
  
  
  0.571
EDY20379.1
PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: pth:PTH_0449 trypsin-like serine proteases.
  
  
  0.543
EDY16773.1
Hypothetical protein; KEGG: dge:Dgeo_2185 peptidase S1 and S6, chymotrypsin/Hap.
  
  
  0.521
EDY19358.1
2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mpt:Mpe_A0844 putative HtrA-like serine protease signal peptide protein.
  
  
  0.520
EDY18910.1
KEGG: scl:sce9304 spermidine/putrescine ABC transporter,spermidine/putrescine-binding protein.
       0.517
EDY18911.1
KEGG: scl:sce9304 spermidine/putrescine ABC transporter,spermidine/putrescine-binding protein.
       0.517
EDY18912.1
Hypothetical protein.
       0.517
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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