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Hoch_4937 Hoch_4937 Hoch_4936 Hoch_4936 Hoch_2276 Hoch_2276 argB argB argC-2 argC-2 Hoch_5578 Hoch_5578 Hoch_1319 Hoch_1319 Hoch_4938 Hoch_4938 Hoch_4939 Hoch_4939 Hoch_3510 Hoch_3510 Hoch_4933 Hoch_4933
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Hoch_4937PFAM: TM2 domain containing protein; KEGG: psp:PSPPH_0471 TM2 domain-containing protein. (194 aa)    
Predicted Functional Partners:
Hoch_4936
KEGG: mxa:MXAN_4137 hypothetical protein.
       0.768
Hoch_2276
PFAM: phosphofructokinase; KEGG: pyrophosphate-dependent fructose 6-phosphate 1-phosphotransferase.
   
    0.560
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
       0.533
argC-2
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
       0.530
Hoch_5578
KEGG: xcb:XC_2630 hypothetical protein.
  
     0.494
Hoch_1319
KEGG: psb:Psyr_2661 hypothetical protein.
  
     0.482
Hoch_4938
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: scl:sce3482 ECF family RNA polymerase sigma factor.
       0.461
Hoch_4939
KEGG: scl:sce6055 hypothetical protein.
       0.461
Hoch_3510
PFAM: Domain of unknown function DUF1821; KEGG: scl:sce3790 hypothetical protein.
  
     0.451
Hoch_4933
PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA ligase domain protein; KEGG: ade:Adeh_4160 ATP-dependent DNA ligase.
       0.413
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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