STRINGSTRING
AEE98040.1 AEE98040.1 AEE98041.1 AEE98041.1 AEE98042.1 AEE98042.1 AEE98046.1 AEE98046.1 AEE98043.1 AEE98043.1 AEE98044.1 AEE98044.1 AEE98045.1 AEE98045.1 rpoC rpoC AEE98047.1 AEE98047.1 rpoB rpoB AEE96848.1 AEE96848.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE98040.1Sigma-70 region 4 type 2; InterPro IPR013249; KEGG: psp:PSPPH_1175 RNA polymerase sigma-70 family protein; PFAM: Sigma-70 region 4 type 2; SPTR: RNA polymerase sigma-70 family protein; PFAM: Sigma-70, region 4. (137 aa)    
Predicted Functional Partners:
AEE98041.1
Hypothetical protein; KEGG: mst:Msp_0171 leucyl-tRNA synthetase; SPTR: LeuS.
       0.773
AEE98042.1
Endodeoxyribonuclease RusA; InterPro IPR008822; KEGG: drm:Dred_0504 endodeoxyribonuclease RusA; PFAM: endodeoxyribonuclease RusA; SPTR: Endodeoxyribonuclease RusA; PFAM: Endodeoxyribonuclease RusA.
       0.773
AEE98046.1
IstB domain protein ATP-binding protein; COGs: COG1484 DNA replication protein; InterPro IPR002611: IPR003593; KEGG: amt:Amet_2601 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; SPTR: IstB domain protein ATP-binding protein; PFAM: IstB-like ATP binding protein.
  
    0.706
AEE98043.1
Hypothetical protein; KEGG: psl:Psta_0302 resolvase domain protein.
       0.701
AEE98044.1
KEGG: cgr:CAGL0H05929g hypothetical protein.
       0.701
AEE98045.1
KEGG: cce:Ccel_1844 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.701
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.676
AEE98047.1
InterPro IPR006497; KEGG: pay:PAU_03574 phage replication protein O; PFAM: replication protein O domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: phage replication protein O; PFAM: Bacteriophage replication protein O; TIGRFAM: phage replication protein O, N-terminal domain.
       0.660
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.651
AEE96848.1
MCP methyltransferase, CheR-type; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780; KEGG: cth:Cthe_0717 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; SPTR: MCP methyltransferase, CheR-type; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain.
    
   0.567
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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