STRINGSTRING
Snas_6200 Snas_6200 Snas_6199 Snas_6199 Snas_6201 Snas_6201
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_6200Hypothetical protein; KEGG: psp:PSPPH_1323 PQQ repeat-containing protein. (491 aa)    
Predicted Functional Partners:
Snas_6199
PFAM: alpha/beta hydrolase fold; KEGG: bmn:BMA10247_A1026 alpha/beta fold family hydrolase.
       0.620
Snas_6201
PFAM: histidine triad (HIT) protein; KEGG: dvm:DvMF_1561 histidine triad (HIT) protein.
       0.550
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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