STRINGSTRING
Elen_1018 Elen_1018 Elen_1031 Elen_1031 Elen_1017 Elen_1017 Elen_1019 Elen_1019 Elen_1020 Elen_1020 Elen_1016 Elen_1016
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_1018PFAM: FAD dependent oxidoreductase; KEGG: psp:PSPPH_1411 hypothetical protein. (570 aa)    
Predicted Functional Partners:
Elen_1031
TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: sat:SYN_02443 SUA5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family.
     0.872
Elen_1017
PFAM: HI0933 family protein; KEGG: sun:SUN_2357 hypothetical protein.
     
 0.789
Elen_1019
Hypothetical protein.
       0.431
Elen_1020
KEGG: cvi:CV_2539 hypothetical protein.
       0.431
Elen_1016
TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: dde:Dde_2852 amino acid carrier protein.
     
 0.413
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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