Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Ccel_1499 | Ccel_1501 | PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: gsu:GSU0972 AAA family ATPase. | PFAM: tail sheath protein; KEGG: sgr:SGR_2066 putative phage tail sheath protein. | 0.892 |
Ccel_1499 | Ccel_1503 | PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: gsu:GSU0972 AAA family ATPase. | KEGG: gsu:GSU0977 hypothetical protein. | 0.849 |
Ccel_1499 | Ccel_1505 | PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: gsu:GSU0972 AAA family ATPase. | TIGRFAM: conserved hypothetical protein; KEGG: gsu:GSU0979 hypothetical protein. | 0.837 |
Ccel_1499 | Ccel_1507 | PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: gsu:GSU0972 AAA family ATPase. | KEGG: mag:amb1890 LysM domain-containing protein. | 0.836 |
Ccel_1499 | Ccel_1508 | PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: gsu:GSU0972 AAA family ATPase. | Phage protein D; KEGG: mag:amb1891 phage protein D. | 0.835 |
Ccel_1499 | Ccel_1511 | PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: gsu:GSU0972 AAA family ATPase. | PFAM: GPW/gp25 family protein; KEGG: gsu:GSU0986 tail lysozyme, putative. | 0.821 |
Ccel_1499 | Ccel_1512 | PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: gsu:GSU0972 AAA family ATPase. | KEGG: noc:Noc_1865 hypothetical protein. | 0.819 |
Ccel_1499 | Ccel_1513 | PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: gsu:GSU0972 AAA family ATPase. | KEGG: npu:Npun_F1413 hypothetical protein. | 0.815 |
Ccel_1499 | Ccel_2400 | PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: gsu:GSU0972 AAA family ATPase. | KEGG: psp:PSPPH_1453 rhs family protein. | 0.621 |
Ccel_1501 | Ccel_1499 | PFAM: tail sheath protein; KEGG: sgr:SGR_2066 putative phage tail sheath protein. | PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: gsu:GSU0972 AAA family ATPase. | 0.892 |
Ccel_1501 | Ccel_1503 | PFAM: tail sheath protein; KEGG: sgr:SGR_2066 putative phage tail sheath protein. | KEGG: gsu:GSU0977 hypothetical protein. | 0.897 |
Ccel_1501 | Ccel_1505 | PFAM: tail sheath protein; KEGG: sgr:SGR_2066 putative phage tail sheath protein. | TIGRFAM: conserved hypothetical protein; KEGG: gsu:GSU0979 hypothetical protein. | 0.966 |
Ccel_1501 | Ccel_1507 | PFAM: tail sheath protein; KEGG: sgr:SGR_2066 putative phage tail sheath protein. | KEGG: mag:amb1890 LysM domain-containing protein. | 0.974 |
Ccel_1501 | Ccel_1508 | PFAM: tail sheath protein; KEGG: sgr:SGR_2066 putative phage tail sheath protein. | Phage protein D; KEGG: mag:amb1891 phage protein D. | 0.992 |
Ccel_1501 | Ccel_1511 | PFAM: tail sheath protein; KEGG: sgr:SGR_2066 putative phage tail sheath protein. | PFAM: GPW/gp25 family protein; KEGG: gsu:GSU0986 tail lysozyme, putative. | 0.993 |
Ccel_1501 | Ccel_1512 | PFAM: tail sheath protein; KEGG: sgr:SGR_2066 putative phage tail sheath protein. | KEGG: noc:Noc_1865 hypothetical protein. | 0.970 |
Ccel_1501 | Ccel_1513 | PFAM: tail sheath protein; KEGG: sgr:SGR_2066 putative phage tail sheath protein. | KEGG: npu:Npun_F1413 hypothetical protein. | 0.969 |
Ccel_1501 | Ccel_2400 | PFAM: tail sheath protein; KEGG: sgr:SGR_2066 putative phage tail sheath protein. | KEGG: psp:PSPPH_1453 rhs family protein. | 0.617 |
Ccel_1503 | Ccel_1499 | KEGG: gsu:GSU0977 hypothetical protein. | PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: gsu:GSU0972 AAA family ATPase. | 0.849 |
Ccel_1503 | Ccel_1501 | KEGG: gsu:GSU0977 hypothetical protein. | PFAM: tail sheath protein; KEGG: sgr:SGR_2066 putative phage tail sheath protein. | 0.897 |
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