Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF20566.1 | AEF20567.1 | Psefu_0586 | Psefu_0587 | KEGG: pmy:Pmen_3988 hypothetical protein. | KEGG: pmy:Pmen_3983 putative phage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3. | 0.720 |
AEF20566.1 | AEF20568.1 | Psefu_0586 | Psefu_0588 | KEGG: pmy:Pmen_3988 hypothetical protein. | KEGG: psp:PSPPH_1888 hypothetical protein. | 0.577 |
AEF20566.1 | AEF21415.1 | Psefu_0586 | Psefu_1439 | KEGG: pmy:Pmen_3988 hypothetical protein. | TIGRFAM: Zinc finger, C4 DksA/TraR-type; KEGG: dda:Dd703_2085 transcriptional regulator, TraR/DksA family. | 0.452 |
AEF20567.1 | AEF20566.1 | Psefu_0587 | Psefu_0586 | KEGG: pmy:Pmen_3983 putative phage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3. | KEGG: pmy:Pmen_3988 hypothetical protein. | 0.720 |
AEF20567.1 | AEF20568.1 | Psefu_0587 | Psefu_0588 | KEGG: pmy:Pmen_3983 putative phage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3. | KEGG: psp:PSPPH_1888 hypothetical protein. | 0.562 |
AEF20568.1 | AEF20566.1 | Psefu_0588 | Psefu_0586 | KEGG: psp:PSPPH_1888 hypothetical protein. | KEGG: pmy:Pmen_3988 hypothetical protein. | 0.577 |
AEF20568.1 | AEF20567.1 | Psefu_0588 | Psefu_0587 | KEGG: psp:PSPPH_1888 hypothetical protein. | KEGG: pmy:Pmen_3983 putative phage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3. | 0.562 |
AEF20568.1 | AEF21415.1 | Psefu_0588 | Psefu_1439 | KEGG: psp:PSPPH_1888 hypothetical protein. | TIGRFAM: Zinc finger, C4 DksA/TraR-type; KEGG: dda:Dd703_2085 transcriptional regulator, TraR/DksA family. | 0.816 |
AEF20568.1 | AEF21445.1 | Psefu_0588 | Psefu_1469 | KEGG: psp:PSPPH_1888 hypothetical protein. | KEGG: ppw:PputW619_3920 hypothetical protein. | 0.538 |
AEF21415.1 | AEF20566.1 | Psefu_1439 | Psefu_0586 | TIGRFAM: Zinc finger, C4 DksA/TraR-type; KEGG: dda:Dd703_2085 transcriptional regulator, TraR/DksA family. | KEGG: pmy:Pmen_3988 hypothetical protein. | 0.452 |
AEF21415.1 | AEF20568.1 | Psefu_1439 | Psefu_0588 | TIGRFAM: Zinc finger, C4 DksA/TraR-type; KEGG: dda:Dd703_2085 transcriptional regulator, TraR/DksA family. | KEGG: psp:PSPPH_1888 hypothetical protein. | 0.816 |
AEF21415.1 | AEF21445.1 | Psefu_1439 | Psefu_1469 | TIGRFAM: Zinc finger, C4 DksA/TraR-type; KEGG: dda:Dd703_2085 transcriptional regulator, TraR/DksA family. | KEGG: ppw:PputW619_3920 hypothetical protein. | 0.453 |
AEF21445.1 | AEF20568.1 | Psefu_1469 | Psefu_0588 | KEGG: ppw:PputW619_3920 hypothetical protein. | KEGG: psp:PSPPH_1888 hypothetical protein. | 0.538 |
AEF21445.1 | AEF21415.1 | Psefu_1469 | Psefu_1439 | KEGG: ppw:PputW619_3920 hypothetical protein. | TIGRFAM: Zinc finger, C4 DksA/TraR-type; KEGG: dda:Dd703_2085 transcriptional regulator, TraR/DksA family. | 0.453 |