STRINGSTRING
AEF21708.1 AEF21708.1 AEF21709.1 AEF21709.1 AEF21710.1 AEF21710.1 rbsD rbsD AEF22479.1 AEF22479.1 rbsK rbsK AEF20554.1 AEF20554.1 AEF20545.1 AEF20545.1 AEF21462.1 AEF21462.1 AEF23121.1 AEF23121.1 AEF21711.1 AEF21711.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF21708.1PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: psp:PSPPH_2125 ribose ABC transporter, periplasmic ribose-binding protein. (318 aa)    
Predicted Functional Partners:
AEF21709.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: ppg:PputGB1_3491 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 0.999
AEF21710.1
Inner-membrane translocator; PFAM: ABC transporter permease; KEGG: pen:PSEEN1954 ribose ABC transporter, permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 0.999
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.990
AEF22479.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: mes:Meso_0839 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.960
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.934
AEF20554.1
KEGG: pfl:PFL_3251 sensor histidine kinase/response regulator; PFAM: ATPase-like, ATP-binding domain; CHASE3; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; Signal transduction response regulator, receiver domain.
   
 
 0.885
AEF20545.1
KEGG: mdi:METDI0924 putative sensor hybrid histidine kinase with multiple PAS/PAC and response regulator receiver domains; PFAM: ATPase-like, ATP-binding domain; PAS fold-4; SMART: ATPase-like, ATP-binding domain; PAC motif.
   
 
 0.883
AEF21462.1
KEGG: pmy:Pmen_1730 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) [...]
  
 
 0.883
AEF23121.1
ATP-binding region ATPase domain protein; KEGG: pfl:PFL_4413 sensory box histidine kinase/response regulator; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Sodium/solute symporter; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain.
   
 
 0.873
AEF21711.1
Transcriptional regulator, LacI family; KEGG: pfl:PFL_2104 ribose operon repressor; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI.
 
  
0.871
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.