STRINGSTRING
Aave_4334 Aave_4334 Aave_4335 Aave_4335 Aave_4336 Aave_4336 Aave_4337 Aave_4337 Aave_4338 Aave_4338 Aave_4339 Aave_4339 Aave_4340 Aave_4340
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_4334KEGG: psp:PSPPH_3580 hypothetical protein. (194 aa)    
Predicted Functional Partners:
Aave_4335
KEGG: bur:Bcep18194_B1775 hypothetical protein.
       0.773
Aave_4336
Hypothetical protein.
       0.773
Aave_4337
Hypothetical protein.
       0.773
Aave_4338
Hypothetical protein.
       0.773
Aave_4339
Hypothetical protein; KEGG: xcv:XCV0561 putative secreted protein.
       0.510
Aave_4340
LigA; KEGG: ade:Adeh_0244 LigA.
       0.475
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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