STRINGSTRING
Plav_0079 Plav_0079 Plav_1968 Plav_1968 Plav_2396 Plav_2396 Plav_0936 Plav_0936 Plav_0648 Plav_0648 Plav_2212 Plav_2212 Plav_1935 Plav_1935 Plav_3153 Plav_3153 Plav_1358 Plav_1358 Plav_1598 Plav_1598 Plav_3481 Plav_3481
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Plav_0079Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: psp:PSPPH_4416 sensory box histidine kinase. (710 aa)    
Predicted Functional Partners:
Plav_1968
KEGG: mag:amb1110 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
 0.866
Plav_2396
Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sensor histidine kinase/response regulator.
 
 
 0.841
Plav_0936
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: mag:amb0567 signal transduction histidine kinase.
 
 
 0.823
Plav_0648
KEGG: bbt:BBta_3094 putative two-component sensor histidine kinase with a ATP-binding domain (C-term); TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.822
Plav_2212
PFAM: response regulator receiver; KEGG: rpc:RPC_3108 response regulator receiver domain protein (CheY-like).
 
 
 0.799
Plav_1935
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; KEGG: mag:amb2546 signal transduction histidine kinase.
 
 
 0.798
Plav_3153
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: mag:amb3096 signal transduction histidine kinase.
 
 
 0.793
Plav_1358
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mag:amb0567 signal transduction histidine kinase.
 
 
 0.791
Plav_1598
PFAM: response regulator receiver; KEGG: rpa:RPA4738 response regulator receiver (CheY-like protein).
 
 
 
 0.790
Plav_3481
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rru:Rru_A3213 PAS/PAC sensor signal transduction histidine kinase.
 
 
 
 0.786
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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