STRINGSTRING
dadX dadX murF murF ddlA ddlA ddlB ddlB AAO55775.1 AAO55775.1 AAO55299.1 AAO55299.1 dadA dadA murI murI AAO53742.1 AAO53742.1 murD murD AAO53656.1 AAO53656.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
dadXAlanine racemase, catabolic; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (357 aa)    
Predicted Functional Partners:
murF
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
   
 0.970
ddlA
D-alanine--D-alanine ligase; Cell wall formation.
 
  
 0.951
ddlB
D-alanine--D-alanine ligase; Cell wall formation.
 
  
 0.944
AAO55775.1
Racemase, putative; See PMID:20190049 for expression data; similar to GP:15021234, and GP:9931312; identified by sequence similarity; putative.
      
 0.844
AAO55299.1
Aminotransferase, classes I and II; See PMID:20190049 for expression data.
    
 0.826
dadA
D-amino acid dehydrogenase, small subunit; Oxidative deamination of D-amino acids.
  
  
 0.818
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
 
   
 0.806
AAO53742.1
Nitrilase, putative; Similar to GP:15143035, and SP:Q03217; identified by sequence similarity; putative.
    
  0.803
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
 
 
 0.735
AAO53656.1
Endoribonuclease L-PSP family protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00004.
  
    0.707
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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