Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO53662.1 | AAO53663.1 | PSPTO_0108 | PSPTO_0109 | Membrane protein, putative; Identified by match to PFAM protein family HMM PF03334. | Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF00070. | 0.826 |
| AAO53662.1 | AAO53664.1 | PSPTO_0108 | PSPTO_0110 | Membrane protein, putative; Identified by match to PFAM protein family HMM PF03334. | Metallo-beta-lactamase superfamily protein; Similar to GP:12721862; identified by sequence similarity; putative. | 0.770 |
| AAO53662.1 | AAO53665.1 | PSPTO_0108 | PSPTO_0111 | Membrane protein, putative; Identified by match to PFAM protein family HMM PF03334. | Sigma-54 dependent transcriptional regulator; Identified by match to PFAM protein family HMM PF02796. | 0.426 |
| AAO53663.1 | AAO53662.1 | PSPTO_0109 | PSPTO_0108 | Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF00070. | Membrane protein, putative; Identified by match to PFAM protein family HMM PF03334. | 0.826 |
| AAO53663.1 | AAO53664.1 | PSPTO_0109 | PSPTO_0110 | Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF00070. | Metallo-beta-lactamase superfamily protein; Similar to GP:12721862; identified by sequence similarity; putative. | 0.870 |
| AAO53663.1 | AAO53665.1 | PSPTO_0109 | PSPTO_0111 | Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF00070. | Sigma-54 dependent transcriptional regulator; Identified by match to PFAM protein family HMM PF02796. | 0.428 |
| AAO53664.1 | AAO53662.1 | PSPTO_0110 | PSPTO_0108 | Metallo-beta-lactamase superfamily protein; Similar to GP:12721862; identified by sequence similarity; putative. | Membrane protein, putative; Identified by match to PFAM protein family HMM PF03334. | 0.770 |
| AAO53664.1 | AAO53663.1 | PSPTO_0110 | PSPTO_0109 | Metallo-beta-lactamase superfamily protein; Similar to GP:12721862; identified by sequence similarity; putative. | Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF00070. | 0.870 |
| AAO53664.1 | AAO53665.1 | PSPTO_0110 | PSPTO_0111 | Metallo-beta-lactamase superfamily protein; Similar to GP:12721862; identified by sequence similarity; putative. | Sigma-54 dependent transcriptional regulator; Identified by match to PFAM protein family HMM PF02796. | 0.473 |
| AAO53665.1 | AAO53662.1 | PSPTO_0111 | PSPTO_0108 | Sigma-54 dependent transcriptional regulator; Identified by match to PFAM protein family HMM PF02796. | Membrane protein, putative; Identified by match to PFAM protein family HMM PF03334. | 0.426 |
| AAO53665.1 | AAO53663.1 | PSPTO_0111 | PSPTO_0109 | Sigma-54 dependent transcriptional regulator; Identified by match to PFAM protein family HMM PF02796. | Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF00070. | 0.428 |
| AAO53665.1 | AAO53664.1 | PSPTO_0111 | PSPTO_0110 | Sigma-54 dependent transcriptional regulator; Identified by match to PFAM protein family HMM PF02796. | Metallo-beta-lactamase superfamily protein; Similar to GP:12721862; identified by sequence similarity; putative. | 0.473 |
| AAO53665.1 | AAO54803.1 | PSPTO_0111 | PSPTO_1278 | Sigma-54 dependent transcriptional regulator; Identified by match to PFAM protein family HMM PF02796. | Sensory box protein/response regulator; See PMID:20190049 for expression data. | 0.489 |
| AAO53665.1 | AAO56678.1 | PSPTO_0111 | PSPTO_3195 | Sigma-54 dependent transcriptional regulator; Identified by match to PFAM protein family HMM PF02796. | Sensor histidine kinase; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00512. | 0.417 |
| AAO53665.1 | rpoN | PSPTO_0111 | PSPTO_4453 | Sigma-54 dependent transcriptional regulator; Identified by match to PFAM protein family HMM PF02796. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.808 |
| AAO54803.1 | AAO53665.1 | PSPTO_1278 | PSPTO_0111 | Sensory box protein/response regulator; See PMID:20190049 for expression data. | Sigma-54 dependent transcriptional regulator; Identified by match to PFAM protein family HMM PF02796. | 0.489 |
| AAO54803.1 | AAO56678.1 | PSPTO_1278 | PSPTO_3195 | Sensory box protein/response regulator; See PMID:20190049 for expression data. | Sensor histidine kinase; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00512. | 0.978 |
| AAO54803.1 | rpoN | PSPTO_1278 | PSPTO_4453 | Sensory box protein/response regulator; See PMID:20190049 for expression data. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.505 |
| AAO56678.1 | AAO53665.1 | PSPTO_3195 | PSPTO_0111 | Sensor histidine kinase; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00512. | Sigma-54 dependent transcriptional regulator; Identified by match to PFAM protein family HMM PF02796. | 0.417 |
| AAO56678.1 | AAO54803.1 | PSPTO_3195 | PSPTO_1278 | Sensor histidine kinase; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00512. | Sensory box protein/response regulator; See PMID:20190049 for expression data. | 0.978 |
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