STRINGSTRING
AAO53672.1 AAO53672.1 AAO53673.1 AAO53673.1 AAO56247.1 AAO56247.1 AAO53705.1 AAO53705.1 AAO53674.1 AAO53674.1 AAO58332.1 AAO58332.1 AAO56977.1 AAO56977.1 AAO53671.1 AAO53671.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO53672.1Na/Pi cotransporter family protein; See PMID:20190049 for expression data; similar to GB:L02320, SP:P35241, and PID:307366; identified by sequence similarity; putative. (550 aa)    
Predicted Functional Partners:
AAO53673.1
Peptidase, M16 family; Identified by match to PFAM protein family HMM PF00675.
       0.613
AAO56247.1
OmpA family protein; Identified by match to TIGR protein family HMM TIGR01352.
     
 0.450
AAO53705.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.435
AAO53674.1
Membrane protein, putative.
       0.432
AAO58332.1
Osmotically-inducible lipoprotein OsmE, putative; See PMID:20190049 for expression data.
  
     0.428
AAO56977.1
Membrane protein, putative.
 
     0.421
AAO53671.1
Methyl-accepting chemotaxis protein; Identified by match to TIGR protein family HMM TIGR01755; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01755.
       0.400
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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