STRINGSTRING
AAO53697.1 AAO53697.1 prlC prlC AAO57259.1 AAO57259.1 mucA mucA AAO55635.1 AAO55635.1 sdhE sdhE AAO57261.1 AAO57261.1 AAO55712.1 AAO55712.1 AAO55041.1 AAO55041.1 rmf rmf AAO55736.1 AAO55736.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AAO53697.1Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. (95 aa)    
Predicted Functional Partners:
prlC
Similar to SP:P27298; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P27298, identified by sequence similarity, putative.
       0.795
AAO57259.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.754
mucA
Sigma factor algU negative regulatory protein MucA; See PMID:20190049 for expression data; similar to SP:P38107; identified by sequence similarity; putative.
  
     0.745
AAO55635.1
Anti-anti-sigma factor, putative; See PMID:20190049 for expression data.
  
     0.742
sdhE
Conserved protein of unknown function; An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH and other flavinylated proteins a [...]
  
     0.702
AAO57261.1
Serine/threonine protein phosphatase; See PMID:20190049 for expression data; similar to GP:15020692; identified by sequence similarity; putative.
  
     0.700
AAO55712.1
Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
  
     0.687
AAO55041.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
  
    0.684
rmf
Ribosome modulation factor-related protein; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family.
  
     0.663
AAO55736.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.644
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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