Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO53730.1 | def-1 | PSPTO_0176 | PSPTO_0177 | LysM domain protein; Similar to GB:L21196, and PID:347174; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:L21196, and PID:347174, identified by sequence similarity, putative. | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.584 |
| AAO53730.1 | fmt | PSPTO_0176 | PSPTO_0178 | LysM domain protein; Similar to GB:L21196, and PID:347174; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:L21196, and PID:347174, identified by sequence similarity, putative. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.482 |
| AAO53730.1 | sun | PSPTO_0176 | PSPTO_0179 | LysM domain protein; Similar to GB:L21196, and PID:347174; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:L21196, and PID:347174, identified by sequence similarity, putative. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.482 |
| AAO53730.1 | trkA | PSPTO_0176 | PSPTO_0180 | LysM domain protein; Similar to GB:L21196, and PID:347174; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:L21196, and PID:347174, identified by sequence similarity, putative. | Trk system potassium uptake protein TrkA; See PMID:20190049 for expression data; similar to SP:P39448; identified by sequence similarity; putative. | 0.488 |
| AAO53735.1 | def-1 | PSPTO_0181 | PSPTO_0177 | Molybdopterin oxidoreductase, alpha subunit; Similar to GP:15158403; identified by sequence similarity; putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.436 |
| AAO53735.1 | fmt | PSPTO_0181 | PSPTO_0178 | Molybdopterin oxidoreductase, alpha subunit; Similar to GP:15158403; identified by sequence similarity; putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.558 |
| AAO53735.1 | sun | PSPTO_0181 | PSPTO_0179 | Molybdopterin oxidoreductase, alpha subunit; Similar to GP:15158403; identified by sequence similarity; putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.550 |
| AAO53735.1 | trkA | PSPTO_0181 | PSPTO_0180 | Molybdopterin oxidoreductase, alpha subunit; Similar to GP:15158403; identified by sequence similarity; putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Trk system potassium uptake protein TrkA; See PMID:20190049 for expression data; similar to SP:P39448; identified by sequence similarity; putative. | 0.550 |
| AAO56946.1 | trkA | PSPTO_3471 | PSPTO_0180 | Monovalent cation:proton antiporter, putative; Similar to GP:15155444, and GP:1072395; identified by sequence similarity; putative. | Trk system potassium uptake protein TrkA; See PMID:20190049 for expression data; similar to SP:P39448; identified by sequence similarity; putative. | 0.453 |
| AAO56946.1 | trkH | PSPTO_3471 | PSPTO_1801 | Monovalent cation:proton antiporter, putative; Similar to GP:15155444, and GP:1072395; identified by sequence similarity; putative. | Potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. | 0.501 |
| def-1 | AAO53730.1 | PSPTO_0177 | PSPTO_0176 | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | LysM domain protein; Similar to GB:L21196, and PID:347174; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:L21196, and PID:347174, identified by sequence similarity, putative. | 0.584 |
| def-1 | AAO53735.1 | PSPTO_0177 | PSPTO_0181 | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Molybdopterin oxidoreductase, alpha subunit; Similar to GP:15158403; identified by sequence similarity; putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.436 |
| def-1 | fmt | PSPTO_0177 | PSPTO_0178 | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.951 |
| def-1 | sun | PSPTO_0177 | PSPTO_0179 | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.739 |
| def-1 | trkA | PSPTO_0177 | PSPTO_0180 | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Trk system potassium uptake protein TrkA; See PMID:20190049 for expression data; similar to SP:P39448; identified by sequence similarity; putative. | 0.645 |
| fmt | AAO53730.1 | PSPTO_0178 | PSPTO_0176 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | LysM domain protein; Similar to GB:L21196, and PID:347174; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:L21196, and PID:347174, identified by sequence similarity, putative. | 0.482 |
| fmt | AAO53735.1 | PSPTO_0178 | PSPTO_0181 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Molybdopterin oxidoreductase, alpha subunit; Similar to GP:15158403; identified by sequence similarity; putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.558 |
| fmt | def-1 | PSPTO_0178 | PSPTO_0177 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.951 |
| fmt | purL | PSPTO_0178 | PSPTO_1459 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.439 |
| fmt | sun | PSPTO_0178 | PSPTO_0179 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.985 |
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